Molecular Biology

• Genetic Code
• IUPAC Nucleotide Symbols
• Sequence Formats & Conversions
• DNA Analysis Software
• Codon Usage
• DNA Properties
• Oligos & Primers
• Restriction Enzymes
• Sequencing
• Plasmids & Vectors
• E. coli Strains

Properties

• DNA Molecular Weight
• Reverse Complement

Restriction Enzymes

• Restriction Map
• Restriction Summary
• Restriction Digest

PCR and Primers

• Primer Map
• PCR Products
• Oligonucleotide Analysis

Alignments

• Pairwise DNA Alignment

ORFs, Codons & Translation

• Translation Map
• Translate
• Back Translate
• Codon Usage
• ORF Finder

Sequence Statistics, Patterns & Motifs

• DNA Pattern Search
• CpG Islands
• DNA Statistics

Format Conversion

• Genbank to FASTA
• EMBL to FASTA
• Genbank Feature Extractor
• EMBL Feature Extractor
• Filter DNA
• Format DNA
• Combine FASTA

Random Sequences

• Random DNA
• Random Coding DNA
• Shuffle DNA

Properties

• Protein Molecular Weight
• Protein Isoelectric Point
• Protein GRAVY

Alignments

• Pairwise Protein Alignment

Random Sequences

• Random Protein
• Shuffle Protein

Protein Statistics, Patterns & Motifs

• Protein Pattern Search
• Protein Stats

Format Conversion

• GenBank Protein Extractor
• EMBL Protein Extractor
• Three to One
• One to Three
• Filter Protein
• Format Protein

Sequence Analysis

• Databases
• Sequence Search
• BLAST & Homology
• Alignments
• ORFs, Splicing & Coding
• DNA Patterns & Motifs
• Transcription
• Sequence Logos

Protein Analysis

• A.A. Symbols
• A.A. Properties
• Protein pI & MW
• Protein Search & Retrieval
• BLAST & Homology
• Protein Alignment
• Domains & Families
• Protein Function

 

• Protein Interactions
• Primary Structure
• Patterns & Motifs
• Subcellular Localization
• Post-Translational Modifications
• Protein Secondary Structure
• Drawing Proteins

Structural Analysis

• 3-D Structure Databases
• Search & Retrieval
• 3-D Structure Comparison
• 3-D Structure Analysis
• Molecular Visualization
• Structure & Function Prediction
• Molecular Dynamic & Simulations
• Structure Docking

• Cell
• Cancer Cell
• EMBO
• J. of Cell Biology
• J. of Exp. Medicine
• Lancet
• Molecular Cell
• Nature
• Nature Cell Biology
• Nature Genetics
• Nature Medicine
• Nature Biotechnology
• Nature Structural Biology
• Proc. Natl. Acad. Sci.
• Science

• Unit Systems &
  Conversions
• Element List
• Periodic Table
• Radioactivity & Radioisotopes
• Literature Search
• Patent Resources
• Grant Writing
• Statistics